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Table 3 Causes of deaths (1st May 2020 to 30th April 2021) (Dharni Block of Amaravati district)

From: Community—Minimal Invasive Tissue Sampling (cMITS) using a modified ambulance for ascertaining the cause of death: A novel approach piloted in a remote inaccessible rural area in India

a: Causes of deaths (Without PCR)

 Parameter

Categories

Number

%

 Sample collection [16]

Cryovial lungs

16

100

 

Cryovial brain

16

100

 

Cryovial liver

7

43.75

 

CSFa

16

100

 

Nasopharyngeal swab

14

87. 5

 Clinical cause of death

Pneumonia

3

18.75

 [16]

COVID-19, ARDSb, Hypoxia

4

25

 

Still birth

2

12.5

 

Brought dead

2

12.5

 

Dengue

1

6.25

 

Unknown

4

25

 CSF Culture [16]

Staphylococcus Aureus

3

18.75

 

Klebsiella Pneumonia

1

6.25

 

Escherichia coli

1

6.25

 Blood Culture [14]

Alpha Haemolytic Streptococcus

1

7.14

 

No growth

13

92.86

 HIVc

Positive

1

6.25

 Malaria

Vivax positive

1

6.25

 Dengue

Positive

1

6.25

b: The link between clinical cause of death and MITS cause of death, to show the added value of MITS

S. No

MITS KIT ID. No

AGE (Days

/Months

/ Yrs.)

Immediate cause of death

Blood culture (growth after 5 days)

CSF culture

HIV

Malaria

Dengue

Nasal swab PCR

Lung PCR

 1

108–002

1 day

Aspiration Pneumonia

No growth

 

Negative

Negative

N/A

K. pneumoniae

Negative

 2

108–003

1.5 month

Pneumonia

No growth

 

Negative

Negative

N/A

NA

M. catarrhalis

 3

108–004

still birth

Still birth

No growth

 

Positive

P. Vivax (Positive)

N/A

Negative

Negative

 4

108–005

6 days

 

No growth

 

Negative

Negative

N/A

K. pneumoniae

K. pneumoniae

 5

108–006

19 years

Brought death

 

Klebsiella pneumonia

Negative

Negative

Positive

NA

Negative

 6

108–007

2 days

 

No growth

Klebsiella Pneumonia

Negative

Negative

N/A

Negative

K. pneumoniae

 7

108–008

45 years

Dengue

No growth

No growth

Negative

Negative

N/A

Negative

Negative

 8

108–009

still birth

Still birth

No report

No report

Negative

Negative

N/A

S. aureus

Negative

 9

108–010

1 month

 

No growth

 

Negative

Negative

N/A

Negative

Negative

 10

108–011

2 Day

 

No report

No report

Negative

Negative

N/A

K. pneumoniae

K. pneumoniae

S. No

MITS KIT ID.No

AGE (Days

/Months

/ Yrs.)

Immediate cause of death

Blood culture (growth after 5 days)

CSF culture

HIV

Malaria

Dengue

Nasal swab PCR

Lung PCR

 11

108–012

45 years

Brought death

Alpha Haemolytic Streptococcus

No growth

Negative

Negative

N/A

Negative

Negative

 12

108–013

11 months

Pneumonia

No growth

Staphylococcus Aureus

Negative

Negative

N/A

Rhinovirus + K. pneumoniae

Negative

 13

108–014

65 Year

Covid-19 (positive)

No growth

Staphylococcus Aureus

Negative

Negative

N/A

Negative

Negative

 14

108–015

18 years

Covid ??

No growth

 

No report

No report

N/A

H. influenzae

Negative

 15

108–016

55 years

ARDS with severe Hypoxia

  

Negative

Negative

N/A

NA

Negative

 16

108–017

70 years

ARDS with severe Hypoxia

  

Negative

Negative

N/A

NA

Negative

  1. aCSF  Cerebrospinal fluid
  2. bARDS Acute respiratory distress syndrome
  3. cHIV  Human immunodeficiency syndrome